< All Topics

03.03 Enzyme: Product Formation


Measuring the Rate of Product Formation

  • Method: Measure the rate of product formation to monitor enzyme activity.
  • Example Reaction: Catalase breaking down hydrogen peroxide (H₂O₂) into water and oxygen (O₂).
  • Catalase: Found in most tissues, detoxifies hydrogen peroxide, which is toxic.
  • Measurement: Oxygen gas produced can be collected in a gas syringe and measured over time.

Course of an Enzyme Reaction

  • Reaction Start:
    • Initial High Rate: When catalase and hydrogen peroxide are first mixed, oxygen bubbles form rapidly.
    • High substrate concentration ensures most enzyme active sites are occupied.
  • Progression:
    • As substrate is converted to product, fewer substrate molecules remain.
    • Decreasing reaction rate as enzyme active sites wait for available substrate.
  • Reaction End:
    • Rate slows down gradually, approaching zero as substrate is depleted.
    • Reaction stops when no more substrate is available.

Explanation of Reaction Rate Changes

  • Factors Affecting Reaction Rate:
    • Enzyme concentration: Number of enzyme molecules present.
    • Enzyme turnover rate: Speed at which enzyme processes and releases substrate.
  • Reaction Graph Curve:
    • Steepest at beginning: Indicates the initial rate of reaction.
    • Slope (tangent) at time 0 gives initial rate, which is the fastest point.

Calculating Initial Rate of Reaction

  • Methods:
    • Tangent Slope: Calculate slope close to time 0 for precise initial rate.
    • Volume in First 30 Seconds: Estimate initial rate by reading off the volume of oxygen produced in the first 30 seconds (e.g., 2.7 cm³/30 s or 5.4 cm³/min).
  • Importance of Using Initial Rate:
    • More accurate reflection of enzyme activity when substrate concentration is highest.
    • Reduces effects of substrate depletion over time.

Example Calculation

  • To calculate the rate of product formation (e.g., oxygen gas) at 30 seconds (0.5 minutes), you would determine the gradient (slope) of the tangent line to the catalyzed curve at that point.
  • The slope gives the rate of change of the product volume over time.

1. Tangent Line Equation

The general form of the tangent line equation is: y=mx+c

Where:

  • y is the volume of oxygen gas (O2) produced.
  • x is the time (in minutes).
  • m is the slope of the tangent line, representing the reaction rate.
  • c is the y-intercept of the tangent line.

2. Calculating the Slope (mmm)


3. Example Calculation


4. Interpreting the Result

  • The reaction rate at 30 seconds is approximately 38.94 units of O2​ per minute.
  • This value represents the instantaneous rate of oxygen production at that time, as indicated by the slope of the tangent line.

Practise Questions

Table of Contents